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新疆桃花柱S-RNase和花粉SFB基因的克隆与分析
陈秋菊, 孟冬, 李威, 顾钊宇, 段续伟, 袁晖, 张懿, 李天忠
0
(中国农业大学 农学与生物技术学院, 北京 100193)
摘要:
为探索新疆桃自交亲和的原因及其与普通桃的分类关系,以4个新疆桃(Prunus ferganensis Kost.et Riab)品种为试材,分别在花柱S-RNase和花粉SFB基因保守区设计引物,在DNA中鉴定其S基因型,并通过全长引物分别克隆4个品种中的S-RNaseSFB全长基因。测序后经分析确定S基因型分别是:‘和田黄肉’ S2S2m,‘喀什1号’S1S2,‘喀什4号’ S2S2,‘黄李光’ S1S2 。DNAMAN软件比对结果表明:S2m-RNase的第602个碱基鸟嘌呤G变成了腺嘌呤A,导致半胱氨酸变成了酪氨酸;SFB1m在第978个碱基后插入155 bp的片段,导致蛋白质翻译提前终止;SFB2m基因由于在第492个碱基处有5 bp的片段插入,使翻译在525 bp处终止。RT-PCR组织特异性分析发现新疆桃4个品种的S-RNase均具有花柱组织特异性表达,SFB均具有花粉组织特异性表达;酵母双杂交试验显示突变的SFB1m和SFB2m能分别与S1-RNase、S2-RNase和S2m-RNase相互作用。以上结果表明新疆桃的S基因与桃其他栽培品种一致,自交亲和性可能与S基因的突变相关,且S基因的突变类型与目前鉴定出的普通桃(Prunus persica L.)突变类型一致,该研究进一步说明新疆桃与普通桃的进化关系较近。
关键词:  新疆桃  自交亲和性  花柱S-RNase  花粉SFB  克隆与分析
DOI:10.11841/j.issn.1007-4333.2015.06.10
投稿时间:2015-01-29
基金项目:国家自然科学基金资助项目(31372035,31171941)
Cloning and analysis of S-RNase and SFB genes in Xinjiang peach (Prunus ferganensis Kost.et Riab)
CHEN Qiu-ju, MENG Dong, LI Wei, GU Zhao-yu, DUAN Xu-wei, YUAN Hui, ZHANG Yi, LI Tian-zhong
(College of Agronomy and Biotechnology, China Agricultural University, Beijing 100193, China)
Abstract:
To explore the reasons of self-compatibility of Xinjiang peach and reveal its relationship with peach.Four Xinjiang cultivars were used in this study.According to the conserved domain of S-RNase genes in style and SFB genes in pollen,we designed primers to identify their S-genotypes using DNA as templates.S-RNase genes and SFB genes of four cultivars were cloned by full-length primers.After sequence alignment by DNAMAN software,we identified S-genotypes of the four cultivars.They were ‘Hetian Huang Rou’ S2S2m,‘Kashgar 1’ S1S2,‘Kashgar 4’ S2S2 and ‘Huang Li Guang’ S1S2 respectively.The results showed that:The 602th base guanine (G) of S2m-RNase gene was replaced by adenine(A) resulting in cysteine into tyrosine; SFB1m of S1 haplotype encoded truncated SFB1m due to a 155 bp insertion after the 978th base.Translation of SFB2m of S2 and S2m haplotypes were stopped at the 525th base due to a 5 bp insertion after the 492th base.Tissue-specific RT-PCR analysis showed that the S-RNase genes of four cultivars had style tissue-specific expression,whereas SFB genes were only expressed in pollen.Yeast two-hybrid experiments showed that SFB1m and SFB2m mutant interacted with S1-RNase,S2-RNase and S2m-RNase,respectively.In conclusion,S genes were the same with peach (Prunus persica L.) cultivars,and then self-compatibility might be associated with mutations of S-RNase and SFB.The mutations of S genes in Xinjiang peach were consistent with the mutations identified in peach.The study further illustrated that the evolutionary relationship between Xingjiang peach and peach (Prunus persica L.) was close.
Key words:  Xingjiang Peach  self-compatibility  S-RNase  SFB  cloning and analysis